Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
NACAE9PAV3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 AL589739.1-201ENST00000607720 493 ntBASIC11.13□□□□□ -0.63
NACAE9PAV3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
NACAE9PAV3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.13□□□□□ -0.63
NACAE9PAV3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.13□□□□□ -0.63
NACAE9PAV3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 AC013726.1-201ENST00000563747 2285 ntBASIC11.13□□□□□ -0.63
NACAE9PAV3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.13□□□□□ -0.63
NACAE9PAV3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
NACAE9PAV3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.13□□□□□ -0.63
NACAE9PAV3 RPL37AP1-201ENST00000412502 279 ntBASIC11.13□□□□□ -0.63
NACAE9PAV3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.13□□□□□ -0.63
NACAE9PAV3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.13□□□□□ -0.63
NACAE9PAV3 API5-211ENST00000534695 560 ntTSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.13□□□□□ -0.63
NACAE9PAV3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.13□□□□□ -0.63
NACAE9PAV3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.13□□□□□ -0.63
NACAE9PAV3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
NACAE9PAV3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
NACAE9PAV3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
NACAE9PAV3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 AJ011931.1-201ENST00000618749 2492 ntBASIC11.12□□□□□ -0.63
NACAE9PAV3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.12□□□□□ -0.63
NACAE9PAV3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
NACAE9PAV3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
NACAE9PAV3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.12□□□□□ -0.63
NACAE9PAV3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.12□□□□□ -0.63
NACAE9PAV3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.12□□□□□ -0.63
NACAE9PAV3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 SLED1-202ENST00000512051 380 ntBASIC11.12□□□□□ -0.63
NACAE9PAV3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.12□□□□□ -0.63
NACAE9PAV3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.12□□□□□ -0.63
NACAE9PAV3 AC025048.3-201ENST00000590609 569 ntBASIC11.12□□□□□ -0.63
NACAE9PAV3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 AC005702.4-201ENST00000618393 416 ntBASIC11.12□□□□□ -0.63
NACAE9PAV3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
NACAE9PAV3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NACAE9PAV3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms