Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 HLA-DMA-203ENST00000395305 777 ntBASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 AL357563.1-201ENST00000404728 395 ntBASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC234644.1-201ENST00000406065 370 ntBASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 AL354861.1-201ENST00000445213 355 ntBASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 RN7SL530P-201ENST00000485097 298 ntBASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 AL590440.2-201ENST00000641973 1595 ntBASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.79■□□□□ 0.6
LOC102724428A0A0B4J2F2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC092638.2-201ENST00000441105 947 ntBASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 CR383656.3-201ENST00000551315 183 ntBASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 RN7SL470P-201ENST00000583069 259 ntBASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC112693.3-201ENST00000624819 1983 ntBASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LOC102724428A0A0B4J2F2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC004837.1-201ENST00000446267 564 ntBASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 C18orf15-201ENST00000623680 2534 ntBASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.77■□□□□ 0.6
LOC102724428A0A0B4J2F2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
LOC102724428A0A0B4J2F2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LOC102724428A0A0B4J2F2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LOC102724428A0A0B4J2F2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
LOC102724428A0A0B4J2F2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LOC102724428A0A0B4J2F2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.77■□□□□ 0.59
LOC102724428A0A0B4J2F2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LOC102724428A0A0B4J2F2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
LOC102724428A0A0B4J2F2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LOC102724428A0A0B4J2F2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms