Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC004945.1-201ENST00000416738 983 ntBASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC125807.1-201ENST00000483097 614 ntBASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 GAPDHP40-201ENST00000505218 1006 ntBASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC027369.6-201ENST00000525520 931 ntBASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC044860.1-202ENST00000559481 777 ntBASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 Z92544.3-201ENST00000624747 417 ntBASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC134684.3-201ENST00000641758 218 ntBASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV6-7A0A0A0MS04 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC018665.1-201ENST00000622927 1362 ntBASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL139400.1-201ENST00000366220 510 ntBASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.61□□□□□ -0.39
TRBV6-7A0A0A0MS04 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms