Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 SLC25A47P1-201ENST00000531577 414 ntBASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 PTP4A1P2-201ENST00000546033 454 ntBASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 AC120045.2-201ENST00000567334 178 ntBASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB6Q9Y5F9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.33□□□□□ -0.11
PCDHGB6Q9Y5F9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGB6Q9Y5F9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
PCDHGB6Q9Y5F9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGB6Q9Y5F9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
PCDHGB6Q9Y5F9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 AC018892.3-201ENST00000623986 2499 ntBASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 AL133267.1-201ENST00000398220 340 ntBASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 RPL5P21-201ENST00000404620 815 ntBASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 KRT18P64-201ENST00000434946 1219 ntBASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 AC104989.1-201ENST00000519711 778 ntBASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 AL049840.4-201ENST00000602422 811 ntBASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 AC133552.6-201ENST00000613406 534 ntBASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 FGD5P1-202ENST00000614866 2498 ntBASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 AC112693.3-201ENST00000624819 1983 ntBASIC14.33□□□□□ -0.12
PCDHGB6Q9Y5F9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PCDHGB6Q9Y5F9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms