Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 AC134915.1-201ENST00000426461 574 ntBASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 MYCLP2-201ENST00000449268 967 ntBASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 CHCHD2P3-201ENST00000603038 451 ntBASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 MIR8072-201ENST00000614241 80 ntBASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.87□□□□□ -0.19
TRAPPC4Q9Y296 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 WASH3P-207ENST00000560956 1394 ntBASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AL356585.2-201ENST00000625078 2396 ntBASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 TP53TG3HP-202ENST00000569755 579 ntBASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAPPC4Q9Y296 AC152010.1-201ENST00000415779 2006 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms