Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 AL645937.2-201ENST00000396808 931 ntBASIC13.61□□□□□ -0.23
ZNF346Q9UL40 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 HLA-K-203ENST00000430151 1046 ntBASIC13.61□□□□□ -0.23
ZNF346Q9UL40 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.61□□□□□ -0.23
ZNF346Q9UL40 RPL13AP25-201ENST00000484130 612 ntBASIC13.61□□□□□ -0.23
ZNF346Q9UL40 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 RRP7BP-205ENST00000566851 833 ntBASIC13.61□□□□□ -0.23
ZNF346Q9UL40 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 AC027307.3-201ENST00000594262 1100 ntBASIC13.61□□□□□ -0.23
ZNF346Q9UL40 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 AC093813.1-201ENST00000605066 256 ntBASIC13.61□□□□□ -0.23
ZNF346Q9UL40 MIR8072-201ENST00000614241 80 ntBASIC13.61□□□□□ -0.23
ZNF346Q9UL40 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF346Q9UL40 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 AC113367.3-201ENST00000508316 1912 ntBASIC13.6□□□□□ -0.23
ZNF346Q9UL40 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 PIN1P1-201ENST00000412108 996 ntBASIC13.6□□□□□ -0.23
ZNF346Q9UL40 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 SERBP1P5-201ENST00000510079 1181 ntBASIC13.6□□□□□ -0.23
ZNF346Q9UL40 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 AC190387.1-201ENST00000551683 408 ntBASIC13.6□□□□□ -0.23
ZNF346Q9UL40 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 BRI3BPP1-201ENST00000594224 787 ntBASIC13.6□□□□□ -0.23
ZNF346Q9UL40 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF346Q9UL40 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.59□□□□□ -0.23
ZNF346Q9UL40 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF346Q9UL40 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF346Q9UL40 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms