Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AL035456.1-201ENST00000456064 1369 ntBASIC13.37□□□□□ -0.27
DUX4Q9UBX2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AL080243.2-201ENST00000418783 582 ntBASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AC097493.3-201ENST00000509725 367 ntBASIC13.37□□□□□ -0.27
DUX4Q9UBX2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AC243562.2-201ENST00000561247 970 ntBASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AC026979.3-201ENST00000607315 403 ntBASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AL390754.1-201ENST00000619088 582 ntBASIC13.37□□□□□ -0.27
DUX4Q9UBX2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.37□□□□□ -0.27
DUX4Q9UBX2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 AC073592.8-201ENST00000624126 511 ntBASIC13.36□□□□□ -0.27
DUX4Q9UBX2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 CETN4P-206ENST00000642099 2168 ntBASIC13.36□□□□□ -0.27
DUX4Q9UBX2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUX4Q9UBX2 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms