Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 AL139094.1-201ENST00000405549 1188 ntBASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 CNN2P10-201ENST00000443067 918 ntBASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 AC104982.3-201ENST00000581995 514 ntBASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HDAC6Q9UBN7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 AC004066.1-201ENST00000502488 802 ntBASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 AP006547.1-201ENST00000563435 692 ntBASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 AL096828.3-201ENST00000615354 462 ntBASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 AL158070.2-201ENST00000623713 1621 ntBASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 AC007292.2-201ENST00000593524 1812 ntBASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HDAC6Q9UBN7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC6Q9UBN7 LINC01101-201ENST00000622953 1884 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms