Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 MSTO2P-201ENST00000314835 1709 ntBASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 AL390755.1-201ENST00000623716 2027 ntBASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 AC005229.1-201ENST00000392885 409 ntBASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 AC145423.3-201ENST00000615987 467 ntBASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 AC106881.1-201ENST00000605849 3329 ntBASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBQLN4Q9NRR5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 TTTY23B-201ENST00000442790 549 ntBASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 COX20P2-201ENST00000452636 358 ntBASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBQLN4Q9NRR5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms