Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 CEND1P1-201ENST00000451006 455 ntBASIC14.93□□□□□ -0.02
SSU72Q9NP77 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 DUX4L47-201ENST00000566374 394 ntBASIC14.93□□□□□ -0.02
SSU72Q9NP77 AC051619.7-201ENST00000568314 623 ntBASIC14.93□□□□□ -0.02
SSU72Q9NP77 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 AP001059.3-201ENST00000619053 235 ntBASIC14.93□□□□□ -0.02
SSU72Q9NP77 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 CICP8-201ENST00000455800 2813 ntBASIC14.93□□□□□ -0.02
SSU72Q9NP77 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 RN7SL618P-201ENST00000477850 296 ntBASIC14.92□□□□□ -0.02
SSU72Q9NP77 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 AL109936.8-201ENST00000641772 604 ntBASIC14.92□□□□□ -0.02
SSU72Q9NP77 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.92□□□□□ -0.02
SSU72Q9NP77 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSU72Q9NP77 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSU72Q9NP77 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SSU72Q9NP77 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSU72Q9NP77 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSU72Q9NP77 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSU72Q9NP77 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms