Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AL137783.1-201ENST00000623494 1896 ntBASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AC113367.3-201ENST00000508316 1912 ntBASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AL136379.1-201ENST00000623471 2642 ntBASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 HLA-V-201ENST00000429037 534 ntBASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 AL442647.2-201ENST00000429864 857 ntBASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 AC018665.1-201ENST00000622927 1362 ntBASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 BX539320.1-201ENST00000623759 877 ntBASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NEUROD4Q9HD90 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.27□□□□□ -0.12
NEUROD4Q9HD90 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 AC120045.2-201ENST00000567334 178 ntBASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 SPDYE22P-201ENST00000582158 798 ntBASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 AL603764.1-201ENST00000636452 321 ntBASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NEUROD4Q9HD90 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms