Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 AL031595.1-201ENST00000623969 4709 ntBASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 DRD5P1-201ENST00000456605 1438 ntBASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 AC107373.2-201ENST00000607735 490 ntBASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CCDC68Q9H2F9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 DMBT1P1-203ENST00000636837 4628 ntBASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 VDAC1P7-201ENST00000462417 847 ntBASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 AC093813.1-201ENST00000605066 256 ntBASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CCDC68Q9H2F9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms