Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 AC006504.4-201ENST00000592118 1568 ntBASIC12.26□□□□□ -0.45
NKX6-2Q9C056 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 AC107375.1-201ENST00000564464 2231 ntBASIC12.25□□□□□ -0.45
NKX6-2Q9C056 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 KRT18P34-201ENST00000488218 1270 ntBASIC12.25□□□□□ -0.45
NKX6-2Q9C056 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 AC015819.3-201ENST00000624305 2674 ntBASIC12.25□□□□□ -0.45
NKX6-2Q9C056 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.25□□□□□ -0.45
NKX6-2Q9C056 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
NKX6-2Q9C056 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NKX6-2Q9C056 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms