Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 AC008132.1-202ENST00000342005 1389 ntBASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 CICP12-201ENST00000455801 843 ntBASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 IMP3P2-201ENST00000489760 475 ntBASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 SNORD3B-2-202ENST00000571722 791 ntBASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 AC005962.1-201ENST00000584100 773 ntBASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 AL008718.2-201ENST00000609206 1313 ntBASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.92■□□□□ 0.14
PAAF1Q9BRP4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 LINC01101-201ENST00000622953 1884 ntBASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 MIR769-201ENST00000390225 118 ntBASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 MARK2P5-201ENST00000507649 634 ntBASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AC091544.8-201ENST00000619490 361 ntBASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PAAF1Q9BRP4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 AGAP7P-201ENST00000582299 2062 ntBASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 AGAP14-201ENST00000624701 2060 ntBASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.9■□□□□ 0.14
PAAF1Q9BRP4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms