Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 AL049840.4-201ENST00000602422 811 ntBASIC13.66□□□□□ -0.22
USB1Q9BQ65 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 AC005520.3-201ENST00000602874 370 ntBASIC13.66□□□□□ -0.22
USB1Q9BQ65 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
USB1Q9BQ65 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 IGHV3-72-202ENST00000621503 303 ntBASIC13.66□□□□□ -0.22
USB1Q9BQ65 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.66□□□□□ -0.22
USB1Q9BQ65 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
USB1Q9BQ65 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
USB1Q9BQ65 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 MAPK10-379ENST00000642013 1385 ntBASIC13.66□□□□□ -0.22
USB1Q9BQ65 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
USB1Q9BQ65 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
USB1Q9BQ65 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
USB1Q9BQ65 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.66□□□□□ -0.22
USB1Q9BQ65 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
USB1Q9BQ65 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
USB1Q9BQ65 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
USB1Q9BQ65 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
USB1Q9BQ65 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.66□□□□□ -0.22
USB1Q9BQ65 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.66□□□□□ -0.22
USB1Q9BQ65 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 AC022532.1-201ENST00000624563 1728 ntBASIC13.65□□□□□ -0.22
USB1Q9BQ65 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 AC112504.1-201ENST00000623415 1841 ntBASIC13.65□□□□□ -0.22
USB1Q9BQ65 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 AP001063.1-201ENST00000568332 529 ntBASIC13.65□□□□□ -0.22
USB1Q9BQ65 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 AL034374.2-201ENST00000605281 548 ntBASIC13.65□□□□□ -0.22
USB1Q9BQ65 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
USB1Q9BQ65 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
USB1Q9BQ65 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.64□□□□□ -0.23
USB1Q9BQ65 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
USB1Q9BQ65 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.64□□□□□ -0.23
USB1Q9BQ65 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
USB1Q9BQ65 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.64□□□□□ -0.23
USB1Q9BQ65 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
USB1Q9BQ65 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms