Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
VGLL1Q99990 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VGLL1Q99990 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.5□□□□□ -0.57
VGLL1Q99990 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.5□□□□□ -0.57
VGLL1Q99990 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.5□□□□□ -0.57
VGLL1Q99990 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
VGLL1Q99990 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.5□□□□□ -0.57
VGLL1Q99990 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
VGLL1Q99990 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.5□□□□□ -0.57
VGLL1Q99990 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.5□□□□□ -0.57
VGLL1Q99990 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.5□□□□□ -0.57
VGLL1Q99990 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.5□□□□□ -0.57
VGLL1Q99990 AP000347.1-202ENST00000435868 847 ntBASIC11.5□□□□□ -0.57
VGLL1Q99990 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.5□□□□□ -0.57
VGLL1Q99990 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.5□□□□□ -0.57
VGLL1Q99990 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.5□□□□□ -0.57
VGLL1Q99990 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.5□□□□□ -0.57
VGLL1Q99990 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.5□□□□□ -0.57
VGLL1Q99990 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.5□□□□□ -0.57
VGLL1Q99990 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
VGLL1Q99990 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.5□□□□□ -0.57
VGLL1Q99990 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.5□□□□□ -0.57
VGLL1Q99990 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.5□□□□□ -0.57
VGLL1Q99990 AP001059.3-201ENST00000619053 235 ntBASIC11.5□□□□□ -0.57
VGLL1Q99990 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.5□□□□□ -0.57
VGLL1Q99990 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.5□□□□□ -0.57
VGLL1Q99990 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 LILRP1-201ENST00000444199 1370 ntBASIC11.5□□□□□ -0.57
VGLL1Q99990 HSPA7-201ENST00000445535 1927 ntBASIC11.5□□□□□ -0.57
VGLL1Q99990 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.5□□□□□ -0.57
VGLL1Q99990 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VGLL1Q99990 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
VGLL1Q99990 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
VGLL1Q99990 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VGLL1Q99990 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.5□□□□□ -0.57
VGLL1Q99990 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.49□□□□□ -0.57
VGLL1Q99990 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
VGLL1Q99990 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.49□□□□□ -0.57
VGLL1Q99990 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.49□□□□□ -0.57
VGLL1Q99990 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
VGLL1Q99990 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
VGLL1Q99990 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.49□□□□□ -0.57
VGLL1Q99990 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.49□□□□□ -0.57
VGLL1Q99990 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms