Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PTPN18Q99952 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN18Q99952 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN18Q99952 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PTPN18Q99952 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN18Q99952 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PTPN18Q99952 KRT17P4-201ENST00000429445 819 ntBASIC16.91■□□□□ 0.3
PTPN18Q99952 FAM86KP-201ENST00000509817 987 ntBASIC16.91■□□□□ 0.3
PTPN18Q99952 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN18Q99952 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN18Q99952 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN18Q99952 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN18Q99952 AC012073.1-201ENST00000606114 1108 ntBASIC16.91■□□□□ 0.3
PTPN18Q99952 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN18Q99952 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN18Q99952 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN18Q99952 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN18Q99952 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PTPN18Q99952 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN18Q99952 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTPN18Q99952 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN18Q99952 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN18Q99952 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN18Q99952 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN18Q99952 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN18Q99952 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN18Q99952 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN18Q99952 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
PTPN18Q99952 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTPN18Q99952 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PTPN18Q99952 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN18Q99952 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PTPN18Q99952 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN18Q99952 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTPN18Q99952 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN18Q99952 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.9■□□□□ 0.3
PTPN18Q99952 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.89■□□□□ 0.3
PTPN18Q99952 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN18Q99952 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN18Q99952 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN18Q99952 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.89■□□□□ 0.3
PTPN18Q99952 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN18Q99952 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN18Q99952 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.89■□□□□ 0.29
PTPN18Q99952 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN18Q99952 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.89■□□□□ 0.29
PTPN18Q99952 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 AP000322.3-201ENST00000608665 388 ntBASIC16.89■□□□□ 0.29
PTPN18Q99952 AC011471.3-201ENST00000623576 402 ntBASIC16.89■□□□□ 0.29
PTPN18Q99952 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN18Q99952 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 AC026471.1-201ENST00000564629 3026 ntBASIC16.89■□□□□ 0.29
PTPN18Q99952 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN18Q99952 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms