Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 AC083801.1-201ENST00000491689 358 ntBASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 AF274858.1-201ENST00000406288 372 ntBASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 MIR4472-1-201ENST00000584349 80 ntBASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 MIR2392-201ENST00000584881 84 ntBASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 HIST1H2APS2-201ENST00000454426 370 ntBASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CSMD1Q96PZ7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 AL157407.1-201ENST00000435784 904 ntBASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD1Q96PZ7 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms