Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 DPM3-202ENST00000368399 517 ntBASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 ACTG1P2-201ENST00000415776 1125 ntBASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 ACTG1P11-201ENST00000425411 1125 ntBASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 RNA5SP423-201ENST00000517127 109 ntBASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 AC100827.2-201ENST00000563214 1194 ntBASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 AC009955.4-201ENST00000597192 544 ntBASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 AL138725.1-201ENST00000407347 1314 ntBASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 KLF2P1-201ENST00000447438 1042 ntBASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 RN7SL11P-201ENST00000471305 293 ntBASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 AC105129.2-201ENST00000559536 390 ntBASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 AC097724.1-201ENST00000609581 426 ntBASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC85AQ96PX6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 AC126365.1-201ENST00000578585 1514 ntBASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 CHMP4BP1-201ENST00000556017 588 ntBASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 BNIP3P13-201ENST00000599968 566 ntBASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CCDC85AQ96PX6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms