Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.55□□□□□ -0.08
VPS33AQ96AX1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 RPSAP43-201ENST00000402237 625 ntBASIC14.54□□□□□ -0.08
VPS33AQ96AX1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 AC010336.2-201ENST00000564226 506 ntBASIC14.54□□□□□ -0.08
VPS33AQ96AX1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 AL360270.3-201ENST00000609118 1348 ntBASIC14.54□□□□□ -0.08
VPS33AQ96AX1 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 AC107918.4-201ENST00000641966 3141 ntBASIC14.54□□□□□ -0.08
VPS33AQ96AX1 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS33AQ96AX1 PTENP1-202ENST00000532280 3996 ntBASIC14.53□□□□□ -0.08
VPS33AQ96AX1 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 BEND3P1-201ENST00000421591 1944 ntBASIC14.53□□□□□ -0.08
VPS33AQ96AX1 AC092135.3-201ENST00000624151 1846 ntBASIC14.53□□□□□ -0.08
VPS33AQ96AX1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 AC051619.7-201ENST00000568314 623 ntBASIC14.53□□□□□ -0.08
VPS33AQ96AX1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS33AQ96AX1 TEX28P1-201ENST00000613479 1221 ntBASIC14.53□□□□□ -0.08
VPS33AQ96AX1 TEX28P2-201ENST00000617764 1221 ntBASIC14.53□□□□□ -0.08
VPS33AQ96AX1 SPDYE12P-201ENST00000618416 771 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms