Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 AL139094.1-201ENST00000405549 1188 ntBASIC13.24□□□□□ -0.29
SPTSSAQ969W0 HLA-K-203ENST00000430151 1046 ntBASIC13.24□□□□□ -0.29
SPTSSAQ969W0 FAM207CP-201ENST00000443486 507 ntBASIC13.24□□□□□ -0.29
SPTSSAQ969W0 AC114812.1-204ENST00000449669 728 ntBASIC13.24□□□□□ -0.29
SPTSSAQ969W0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 SERBP1P5-201ENST00000510079 1181 ntBASIC13.24□□□□□ -0.29
SPTSSAQ969W0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 AC092552.1-201ENST00000547243 906 ntBASIC13.24□□□□□ -0.29
SPTSSAQ969W0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 AC027796.2-201ENST00000575326 344 ntBASIC13.24□□□□□ -0.29
SPTSSAQ969W0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 AL132655.2-201ENST00000596276 594 ntBASIC13.24□□□□□ -0.29
SPTSSAQ969W0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 LINC00552-201ENST00000625151 2579 ntBASIC13.24□□□□□ -0.29
SPTSSAQ969W0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SPTSSAQ969W0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 KRT8P22-201ENST00000562317 1415 ntBASIC13.23□□□□□ -0.29
SPTSSAQ969W0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 AC126335.2-201ENST00000623362 4637 ntBASIC13.23□□□□□ -0.29
SPTSSAQ969W0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 AC018665.1-201ENST00000622927 1362 ntBASIC13.23□□□□□ -0.29
SPTSSAQ969W0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 AC018529.2-202ENST00000611482 3087 ntBASIC13.23□□□□□ -0.29
SPTSSAQ969W0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 UGT1A2P-201ENST00000454886 866 ntBASIC13.23□□□□□ -0.29
SPTSSAQ969W0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSAQ969W0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms