Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 AC016694.1-201ENST00000434179 700 ntBASIC13.23□□□□□ -0.29
TMEM54Q969K7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 TPT1P11-201ENST00000458482 498 ntBASIC13.23□□□□□ -0.29
TMEM54Q969K7 RNA5SP486-201ENST00000515961 83 ntBASIC13.23□□□□□ -0.29
TMEM54Q969K7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM54Q969K7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM54Q969K7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 FKBP4P6-201ENST00000457486 1332 ntBASIC13.22□□□□□ -0.29
TMEM54Q969K7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 ECM1P1-201ENST00000604092 1279 ntBASIC13.22□□□□□ -0.29
TMEM54Q969K7 AC012645.4-201ENST00000610691 1061 ntBASIC13.22□□□□□ -0.29
TMEM54Q969K7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 AC011840.2-201ENST00000563063 1520 ntBASIC13.22□□□□□ -0.29
TMEM54Q969K7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM54Q969K7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM54Q969K7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM54Q969K7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM54Q969K7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms