Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 RNU1-114P-201ENST00000365297 166 ntBASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 AC244107.1-201ENST00000442033 332 ntBASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 CROCCP4-201ENST00000457096 498 ntBASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 AL512343.1-201ENST00000605837 169 ntBASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 AC017083.2-201ENST00000608069 979 ntBASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 NORAD-201ENST00000565493 5339 ntBASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 AC005229.1-201ENST00000392885 409 ntBASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 AC022137.2-201ENST00000503482 481 ntBASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 AP005019.2-201ENST00000615104 511 ntBASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SMARCC2Q8TAQ2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 KRT18P25-201ENST00000508931 1278 ntBASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMARCC2Q8TAQ2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms