Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AL583810.1-201ENST00000553344 1045 ntBASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 GNRHR2-203ENST00000581100 1187 ntBASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 AP005019.2-201ENST00000615104 511 ntBASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 BX539320.1-201ENST00000623759 877 ntBASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 RHOXF1P1-202ENST00000635473 501 ntBASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 AL137784.3-201ENST00000623858 2288 ntBASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDND2Q8NHS1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AC007686.3-201ENST00000619017 3487 ntBASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AC022494.1-201ENST00000466044 728 ntBASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 RNA5SP412-201ENST00000516234 123 ntBASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AC079316.1-201ENST00000548397 411 ntBASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 RN7SL219P-201ENST00000582872 296 ntBASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 AC041040.2-201ENST00000622926 2899 ntBASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDND2Q8NHS1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDND2Q8NHS1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms