Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KLHDC9Q8NEP7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHDC9Q8NEP7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHDC9Q8NEP7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHDC9Q8NEP7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
KLHDC9Q8NEP7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 HIST2H2BA-201ENST00000412169 381 ntBASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 AC107464.3-201ENST00000609172 737 ntBASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 AC105137.3-201ENST00000617588 984 ntBASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 AC112693.3-201ENST00000624819 1983 ntBASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 AL590440.2-201ENST00000641973 1595 ntBASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 OR6D1P-203ENST00000641209 4860 ntBASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHDC9Q8NEP7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 DUX4L50-201ENST00000455245 715 ntBASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 AC027237.1-201ENST00000560942 655 ntBASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 AL022334.2-201ENST00000610000 484 ntBASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 AL365203.3-201ENST00000609742 2057 ntBASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 AC023024.2-201ENST00000623561 1993 ntBASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KLHDC9Q8NEP7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 AC126365.1-201ENST00000578585 1514 ntBASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 KRT8P28-201ENST00000433288 1390 ntBASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 WASH3P-207ENST00000560956 1394 ntBASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KLHDC9Q8NEP7 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms