Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AC010141.1-201ENST00000411585 623 ntBASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AC008267.1-201ENST00000474858 1069 ntBASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AC026434.2-201ENST00000506094 1078 ntBASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AC004466.1-201ENST00000599515 1080 ntBASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 U62317.3-201ENST00000608319 855 ntBASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 SSR4P1-203ENST00000599569 2260 ntBASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 AL360270.3-201ENST00000609118 1348 ntBASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 AC006480.2-201ENST00000609770 1337 ntBASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 SNORD3B-2-202ENST00000571722 791 ntBASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 MIR4683-201ENST00000579659 81 ntBASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 NAP1L6-202ENST00000641404 1222 ntBASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 AC020658.6-201ENST00000623564 1870 ntBASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYNPOQ8N3V7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms