Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST3Q8N1M1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 AC023157.3-201ENST00000619086 2088 ntBASIC14.03□□□□□ -0.16
BEST3Q8N1M1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 EIF3FP3-201ENST00000434851 1086 ntBASIC14.03□□□□□ -0.16
BEST3Q8N1M1 PFN1P12-201ENST00000455938 534 ntBASIC14.03□□□□□ -0.16
BEST3Q8N1M1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 AC090616.6-203ENST00000579186 1945 ntBASIC14.03□□□□□ -0.16
BEST3Q8N1M1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST3Q8N1M1 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 CICP11-201ENST00000434745 2827 ntBASIC14.02□□□□□ -0.16
BEST3Q8N1M1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 PPT1-215ENST00000641471 2368 ntBASIC14.02□□□□□ -0.16
BEST3Q8N1M1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST3Q8N1M1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 CD8B2-202ENST00000417670 633 ntBASIC14.02□□□□□ -0.17
BEST3Q8N1M1 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 AC022616.1-201ENST00000518688 554 ntBASIC14.02□□□□□ -0.17
BEST3Q8N1M1 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 AC091271.1-201ENST00000611877 1162 ntBASIC14.02□□□□□ -0.17
BEST3Q8N1M1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms