Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 AC090505.1-201ENST00000430515 1834 ntBASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC170Q8IYT3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 AC254562.1-201ENST00000417586 456 ntBASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 AL158212.4-201ENST00000624062 1286 ntBASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC170Q8IYT3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC170Q8IYT3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC170Q8IYT3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC170Q8IYT3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC170Q8IYT3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 AL122018.1-201ENST00000446607 2310 ntBASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 AL139400.1-201ENST00000366220 510 ntBASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 RPSAP43-201ENST00000402237 625 ntBASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 HLA-J-203ENST00000494367 1087 ntBASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC170Q8IYT3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms