Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AC008723.1-201ENST00000506922 207 ntBASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 RBM8B-201ENST00000555532 525 ntBASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AC026803.1-201ENST00000569130 274 ntBASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AL109837.1-201ENST00000603272 613 ntBASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AC103810.10-201ENST00000606504 343 ntBASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AL805961.1-201ENST00000642026 753 ntBASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 WASH3P-207ENST00000560956 1394 ntBASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS4Q8IUM7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS4Q8IUM7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS4Q8IUM7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
NPAS4Q8IUM7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
NPAS4Q8IUM7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.96■□□□□ 0.14
NPAS4Q8IUM7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS4Q8IUM7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 OR2K2-202ENST00000374428 1038 ntBASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 AC026320.2-201ENST00000434379 478 ntBASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 AC012183.1-201ENST00000625197 499 ntBASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 CYP4F23P-201ENST00000593402 1579 ntBASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS4Q8IUM7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.94■□□□□ 0.14
NPAS4Q8IUM7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS4Q8IUM7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS4Q8IUM7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPAS4Q8IUM7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms