Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 OR2R1P-201ENST00000441404 914 ntBASIC18.68■□□□□ 0.58
SMIM5Q71RC9 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.68■□□□□ 0.58
SMIM5Q71RC9 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 GCOM2-201ENST00000509133 1104 ntBASIC18.68■□□□□ 0.58
SMIM5Q71RC9 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM5Q71RC9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.67■□□□□ 0.58
SMIM5Q71RC9 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 AC012073.1-201ENST00000606114 1108 ntBASIC18.67■□□□□ 0.58
SMIM5Q71RC9 AP003392.6-201ENST00000607709 325 ntBASIC18.67■□□□□ 0.58
SMIM5Q71RC9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM5Q71RC9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.66■□□□□ 0.58
SMIM5Q71RC9 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 MIR3188-201ENST00000583494 85 ntBASIC18.66■□□□□ 0.58
SMIM5Q71RC9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 FO393412.1-201ENST00000619841 382 ntBASIC18.66■□□□□ 0.58
SMIM5Q71RC9 AC148477.9-201ENST00000623974 539 ntBASIC18.66■□□□□ 0.58
SMIM5Q71RC9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 AP005117.1-202ENST00000581724 1908 ntBASIC18.66■□□□□ 0.58
SMIM5Q71RC9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SMIM5Q71RC9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms