Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 AL157414.3-201ENST00000624276 1954 ntBASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H3F3CQ6NXT2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 CLUHP2-201ENST00000426660 1303 ntBASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AC026434.2-201ENST00000506094 1078 ntBASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AL391280.1-201ENST00000506969 1062 ntBASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AC004466.1-201ENST00000599515 1080 ntBASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AC073413.1-201ENST00000603927 732 ntBASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 SNX18-202ENST00000343017 3140 ntBASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 TMBIM7P-203ENST00000641617 1718 ntBASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 KRT8P44-201ENST00000441609 1350 ntBASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.95□□□□□ -0.18
H3F3CQ6NXT2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
H3F3CQ6NXT2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms