Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 AC104457.1-201ENST00000401024 814 ntBASIC14.24□□□□□ -0.13
LPCAT4Q643R3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 AC073648.2-201ENST00000510116 352 ntBASIC14.24□□□□□ -0.13
LPCAT4Q643R3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 AC012640.2-201ENST00000561606 901 ntBASIC14.24□□□□□ -0.13
LPCAT4Q643R3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 AC018665.1-201ENST00000622927 1362 ntBASIC14.23□□□□□ -0.13
LPCAT4Q643R3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 AC105233.2-201ENST00000523697 349 ntBASIC14.23□□□□□ -0.13
LPCAT4Q643R3 AF238378.1-201ENST00000526806 358 ntBASIC14.23□□□□□ -0.13
LPCAT4Q643R3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 AF228730.5-201ENST00000530288 346 ntBASIC14.23□□□□□ -0.13
LPCAT4Q643R3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LPCAT4Q643R3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LPCAT4Q643R3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms