Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC93Q567U6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC93Q567U6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC93Q567U6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC93Q567U6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC93Q567U6 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 KRT18P66-201ENST00000452970 1269 ntBASIC18.36■□□□□ 0.53
CCDC93Q567U6 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC93Q567U6 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 AL109837.1-201ENST00000603272 613 ntBASIC18.36■□□□□ 0.53
CCDC93Q567U6 AC006058.4-201ENST00000624016 1670 ntBASIC18.36■□□□□ 0.53
CCDC93Q567U6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC93Q567U6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC93Q567U6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC93Q567U6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 AC099063.4-201ENST00000641099 1602 ntBASIC18.35■□□□□ 0.53
CCDC93Q567U6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 RN7SKP230-201ENST00000365642 335 ntBASIC18.35■□□□□ 0.53
CCDC93Q567U6 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC93Q567U6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC93Q567U6 AC025271.4-201ENST00000621477 1726 ntBASIC18.35■□□□□ 0.53
CCDC93Q567U6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 AC008723.1-201ENST00000506922 207 ntBASIC18.34■□□□□ 0.53
CCDC93Q567U6 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 MIR3677-201ENST00000578964 60 ntBASIC18.34■□□□□ 0.53
CCDC93Q567U6 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC93Q567U6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC93Q567U6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC93Q567U6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC93Q567U6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC93Q567U6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC93Q567U6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC93Q567U6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC93Q567U6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC93Q567U6 AL137783.1-201ENST00000623494 1896 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms