Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.24■□□□□ 0.35
USH1GQ495M9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.24■□□□□ 0.35
USH1GQ495M9 GPAA1P2-201ENST00000417923 928 ntBASIC17.24■□□□□ 0.35
USH1GQ495M9 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
USH1GQ495M9 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
USH1GQ495M9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.24■□□□□ 0.35
USH1GQ495M9 AC002472.3-201ENST00000640124 621 ntBASIC17.24■□□□□ 0.35
USH1GQ495M9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USH1GQ495M9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.24■□□□□ 0.35
USH1GQ495M9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.23■□□□□ 0.35
USH1GQ495M9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
USH1GQ495M9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
USH1GQ495M9 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.23■□□□□ 0.35
USH1GQ495M9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
USH1GQ495M9 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 AC005730.2-201ENST00000564549 1184 ntBASIC17.23■□□□□ 0.35
USH1GQ495M9 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.23■□□□□ 0.35
USH1GQ495M9 AL358472.3-201ENST00000608147 415 ntBASIC17.23■□□□□ 0.35
USH1GQ495M9 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.23■□□□□ 0.35
USH1GQ495M9 AC022532.1-201ENST00000624563 1728 ntBASIC17.23■□□□□ 0.35
USH1GQ495M9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.23■□□□□ 0.35
USH1GQ495M9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.23■□□□□ 0.35
USH1GQ495M9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USH1GQ495M9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.23■□□□□ 0.35
USH1GQ495M9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.23■□□□□ 0.35
USH1GQ495M9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USH1GQ495M9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USH1GQ495M9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
USH1GQ495M9 AC092384.3-202ENST00000564646 2873 ntBASIC17.22■□□□□ 0.35
USH1GQ495M9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USH1GQ495M9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.22■□□□□ 0.35
USH1GQ495M9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
USH1GQ495M9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.22■□□□□ 0.35
USH1GQ495M9 ACE3P-201ENST00000423435 1973 ntBASIC17.22■□□□□ 0.35
USH1GQ495M9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USH1GQ495M9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USH1GQ495M9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USH1GQ495M9 AC006486.2-201ENST00000624246 2199 ntBASIC17.22■□□□□ 0.35
USH1GQ495M9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.22■□□□□ 0.35
USH1GQ495M9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USH1GQ495M9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USH1GQ495M9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms