Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAE1P78406 RN7SKP230-201ENST00000365642 335 ntBASIC14.25□□□□□ -0.13
RAE1P78406 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 TLE1P1-201ENST00000422965 589 ntBASIC14.25□□□□□ -0.13
RAE1P78406 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAE1P78406 TERF1P3-201ENST00000505638 1227 ntBASIC14.25□□□□□ -0.13
RAE1P78406 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAE1P78406 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.25□□□□□ -0.13
RAE1P78406 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.25□□□□□ -0.13
RAE1P78406 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
RAE1P78406 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAE1P78406 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 GRK6P1-201ENST00000400595 1711 ntBASIC14.24□□□□□ -0.13
RAE1P78406 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RAE1P78406 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RAE1P78406 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RAE1P78406 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAE1P78406 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAE1P78406 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.24□□□□□ -0.13
RAE1P78406 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.24□□□□□ -0.13
RAE1P78406 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
RAE1P78406 CRB3P1-201ENST00000449338 276 ntBASIC14.24□□□□□ -0.13
RAE1P78406 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.24□□□□□ -0.13
RAE1P78406 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.24□□□□□ -0.13
RAE1P78406 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.24□□□□□ -0.13
RAE1P78406 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.24□□□□□ -0.13
RAE1P78406 AC009486.1-201ENST00000569860 813 ntBASIC14.24□□□□□ -0.13
RAE1P78406 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.24□□□□□ -0.13
RAE1P78406 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAE1P78406 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAE1P78406 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.24□□□□□ -0.13
RAE1P78406 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.24□□□□□ -0.13
RAE1P78406 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAE1P78406 AC063926.3-201ENST00000624734 5658 ntBASIC14.24□□□□□ -0.13
RAE1P78406 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 CLUHP2-201ENST00000426660 1303 ntBASIC14.23□□□□□ -0.13
RAE1P78406 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.23□□□□□ -0.13
RAE1P78406 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.23□□□□□ -0.13
RAE1P78406 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.23□□□□□ -0.13
RAE1P78406 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAE1P78406 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.23□□□□□ -0.13
RAE1P78406 POM121L8P-201ENST00000417732 1281 ntBASIC14.23□□□□□ -0.13
RAE1P78406 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.23□□□□□ -0.13
RAE1P78406 POM121L9P-203ENST00000441984 1285 ntBASIC14.23□□□□□ -0.13
RAE1P78406 AC012441.1-201ENST00000446669 685 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms