Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.24□□□□□ -0.13
RPS3AP61247 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS3AP61247 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.24□□□□□ -0.13
RPS3AP61247 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS3AP61247 AC093004.1-201ENST00000508850 424 ntBASIC14.24□□□□□ -0.13
RPS3AP61247 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS3AP61247 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
RPS3AP61247 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RPS3AP61247 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
RPS3AP61247 AC190387.1-201ENST00000551683 408 ntBASIC14.24□□□□□ -0.13
RPS3AP61247 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.24□□□□□ -0.13
RPS3AP61247 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS3AP61247 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPS3AP61247 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
RPS3AP61247 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.24□□□□□ -0.13
RPS3AP61247 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.24□□□□□ -0.13
RPS3AP61247 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RPS3AP61247 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS3AP61247 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.24□□□□□ -0.13
RPS3AP61247 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RPS3AP61247 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPS3AP61247 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS3AP61247 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.23□□□□□ -0.13
RPS3AP61247 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 BX640514.1-201ENST00000583223 1918 ntBASIC14.23□□□□□ -0.13
RPS3AP61247 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.23□□□□□ -0.13
RPS3AP61247 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
RPS3AP61247 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.23□□□□□ -0.13
RPS3AP61247 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RPS3AP61247 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RPS3AP61247 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.23□□□□□ -0.13
RPS3AP61247 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 AC087499.6-201ENST00000411576 835 ntBASIC14.23□□□□□ -0.13
RPS3AP61247 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.23□□□□□ -0.13
RPS3AP61247 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.23□□□□□ -0.13
RPS3AP61247 SPTLC1P1-201ENST00000447199 261 ntBASIC14.23□□□□□ -0.13
RPS3AP61247 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.23□□□□□ -0.13
RPS3AP61247 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.23□□□□□ -0.13
RPS3AP61247 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.23□□□□□ -0.13
RPS3AP61247 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.23□□□□□ -0.13
RPS3AP61247 SRD5A3P1-201ENST00000603021 949 ntBASIC14.23□□□□□ -0.13
RPS3AP61247 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.23□□□□□ -0.13
RPS3AP61247 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.23□□□□□ -0.13
RPS3AP61247 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.23□□□□□ -0.13
RPS3AP61247 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RPS3AP61247 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RPS3AP61247 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RPS3AP61247 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.23□□□□□ -0.13
RPS3AP61247 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.23□□□□□ -0.13
RPS3AP61247 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.23□□□□□ -0.13
RPS3AP61247 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RPS3AP61247 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS3AP61247 AL391825.1-201ENST00000457671 1364 ntBASIC14.22□□□□□ -0.13
RPS3AP61247 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.22□□□□□ -0.13
RPS3AP61247 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPS3AP61247 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms