Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 AC018892.3-201ENST00000623986 2499 ntBASIC11.79□□□□□ -0.52
RAB5BP61020 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
RAB5BP61020 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB5BP61020 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC11.79□□□□□ -0.52
RAB5BP61020 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 EMC9-206ENST00000560403 872 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 TERC-201ENST00000602385 541 ntBASIC11.79□□□□□ -0.52
RAB5BP61020 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB5BP61020 AP001412.1-201ENST00000608405 714 ntBASIC11.79□□□□□ -0.52
RAB5BP61020 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
RAB5BP61020 MMD2-204ENST00000612910 778 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB5BP61020 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC11.79□□□□□ -0.52
RAB5BP61020 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RAB5BP61020 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC11.79□□□□□ -0.52
RAB5BP61020 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 AC243591.1-201ENST00000452967 1364 ntBASIC11.79□□□□□ -0.52
RAB5BP61020 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RAB5BP61020 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.78□□□□□ -0.52
RAB5BP61020 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RAB5BP61020 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB5BP61020 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 AC125634.1-201ENST00000438758 1403 ntBASIC11.78□□□□□ -0.52
RAB5BP61020 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB5BP61020 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB5BP61020 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB5BP61020 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB5BP61020 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RAB5BP61020 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB5BP61020 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
RAB5BP61020 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.78□□□□□ -0.52
RAB5BP61020 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.78□□□□□ -0.52
RAB5BP61020 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RAB5BP61020 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RAB5BP61020 SIGLEC30P-201ENST00000455569 941 ntBASIC11.78□□□□□ -0.52
RAB5BP61020 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.78□□□□□ -0.52
RAB5BP61020 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC11.78□□□□□ -0.52
RAB5BP61020 ZNF444P1-201ENST00000559497 298 ntBASIC11.78□□□□□ -0.52
RAB5BP61020 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.78□□□□□ -0.52
RAB5BP61020 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms