Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SUMO3P55854 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SUMO3P55854 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 CICP24-201ENST00000605464 2705 ntBASIC13.61□□□□□ -0.23
SUMO3P55854 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 RN7SKP230-201ENST00000365642 335 ntBASIC13.61□□□□□ -0.23
SUMO3P55854 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 FAM8A4P-201ENST00000435433 1213 ntBASIC13.61□□□□□ -0.23
SUMO3P55854 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.61□□□□□ -0.23
SUMO3P55854 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.61□□□□□ -0.23
SUMO3P55854 GCOM2-201ENST00000509133 1104 ntBASIC13.61□□□□□ -0.23
SUMO3P55854 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 AC106820.3-201ENST00000561653 397 ntBASIC13.61□□□□□ -0.23
SUMO3P55854 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.61□□□□□ -0.23
SUMO3P55854 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.61□□□□□ -0.23
SUMO3P55854 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 AC007292.2-201ENST00000593524 1812 ntBASIC13.61□□□□□ -0.23
SUMO3P55854 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.61□□□□□ -0.23
SUMO3P55854 AL596257.1-201ENST00000641463 2694 ntBASIC13.61□□□□□ -0.23
SUMO3P55854 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SUMO3P55854 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SUMO3P55854 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SUMO3P55854 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 AC006001.1-201ENST00000325130 474 ntBASIC13.6□□□□□ -0.23
SUMO3P55854 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.6□□□□□ -0.23
SUMO3P55854 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.6□□□□□ -0.23
SUMO3P55854 RPL7P3-201ENST00000441388 714 ntBASIC13.6□□□□□ -0.23
SUMO3P55854 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.6□□□□□ -0.23
SUMO3P55854 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.6□□□□□ -0.23
SUMO3P55854 KRT17P8-201ENST00000540749 863 ntBASIC13.6□□□□□ -0.23
SUMO3P55854 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.6□□□□□ -0.23
SUMO3P55854 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.6□□□□□ -0.23
SUMO3P55854 RAB43P1-201ENST00000561790 589 ntBASIC13.6□□□□□ -0.23
SUMO3P55854 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.6□□□□□ -0.23
SUMO3P55854 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 AC244669.2-201ENST00000612320 853 ntBASIC13.6□□□□□ -0.23
SUMO3P55854 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
SUMO3P55854 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.6□□□□□ -0.23
SUMO3P55854 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SUMO3P55854 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.6□□□□□ -0.23
SUMO3P55854 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SUMO3P55854 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SUMO3P55854 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.6□□□□□ -0.23
SUMO3P55854 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.6□□□□□ -0.23
SUMO3P55854 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SUMO3P55854 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.59□□□□□ -0.23
SUMO3P55854 AC011840.2-201ENST00000563063 1520 ntBASIC13.59□□□□□ -0.23
SUMO3P55854 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SUMO3P55854 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.59□□□□□ -0.23
SUMO3P55854 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms