Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.21■□□□□ 0.03
LIMK2P53671 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LIMK2P53671 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LIMK2P53671 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LIMK2P53671 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.21■□□□□ 0.03
LIMK2P53671 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.21■□□□□ 0.03
LIMK2P53671 HLA-V-201ENST00000429037 534 ntBASIC15.21■□□□□ 0.03
LIMK2P53671 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.21■□□□□ 0.03
LIMK2P53671 AC234783.1-201ENST00000441761 496 ntBASIC15.21■□□□□ 0.03
LIMK2P53671 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.21■□□□□ 0.03
LIMK2P53671 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.21■□□□□ 0.03
LIMK2P53671 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.21■□□□□ 0.03
LIMK2P53671 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
LIMK2P53671 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.21■□□□□ 0.03
LIMK2P53671 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.21■□□□□ 0.03
LIMK2P53671 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.21■□□□□ 0.03
LIMK2P53671 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.21■□□□□ 0.03
LIMK2P53671 AC133539.2-201ENST00000604757 467 ntBASIC15.21■□□□□ 0.03
LIMK2P53671 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LIMK2P53671 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LIMK2P53671 AL157414.3-201ENST00000624276 1954 ntBASIC15.21■□□□□ 0.03
LIMK2P53671 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LIMK2P53671 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.21■□□□□ 0.03
LIMK2P53671 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.21■□□□□ 0.03
LIMK2P53671 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LIMK2P53671 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LIMK2P53671 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LIMK2P53671 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LIMK2P53671 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LIMK2P53671 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LIMK2P53671 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LIMK2P53671 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 KRT8P22-201ENST00000562317 1415 ntBASIC15.2■□□□□ 0.02
LIMK2P53671 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LIMK2P53671 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.2■□□□□ 0.02
LIMK2P53671 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.2■□□□□ 0.02
LIMK2P53671 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.2■□□□□ 0.02
LIMK2P53671 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 AL162726.2-201ENST00000438986 1017 ntBASIC15.2■□□□□ 0.02
LIMK2P53671 RPS2P32-201ENST00000439199 892 ntBASIC15.2■□□□□ 0.02
LIMK2P53671 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LIMK2P53671 FAM86LP-201ENST00000478302 853 ntBASIC15.2■□□□□ 0.02
LIMK2P53671 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.2■□□□□ 0.02
LIMK2P53671 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.2■□□□□ 0.02
LIMK2P53671 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.2■□□□□ 0.02
LIMK2P53671 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.2■□□□□ 0.02
LIMK2P53671 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.2■□□□□ 0.02
LIMK2P53671 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.2■□□□□ 0.02
LIMK2P53671 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.2■□□□□ 0.02
LIMK2P53671 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LIMK2P53671 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LIMK2P53671 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.2■□□□□ 0.02
LIMK2P53671 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIMK2P53671 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.19■□□□□ 0.02
LIMK2P53671 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.19■□□□□ 0.02
LIMK2P53671 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.19■□□□□ 0.02
LIMK2P53671 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIMK2P53671 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms