Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.96■□□□□ 0.31
USP11P51784 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
USP11P51784 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.96■□□□□ 0.31
USP11P51784 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP11P51784 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.96■□□□□ 0.3
USP11P51784 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.96■□□□□ 0.3
USP11P51784 FAM45BP-202ENST00000592932 1624 ntBASIC16.96■□□□□ 0.3
USP11P51784 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP11P51784 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP11P51784 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USP11P51784 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
USP11P51784 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
USP11P51784 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USP11P51784 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USP11P51784 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USP11P51784 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
USP11P51784 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.95■□□□□ 0.3
USP11P51784 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.95■□□□□ 0.3
USP11P51784 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.95■□□□□ 0.3
USP11P51784 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.95■□□□□ 0.3
USP11P51784 PPY2P-201ENST00000582808 702 ntBASIC16.95■□□□□ 0.3
USP11P51784 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.95■□□□□ 0.3
USP11P51784 AC010328.2-201ENST00000597698 1111 ntBASIC16.95■□□□□ 0.3
USP11P51784 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
USP11P51784 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP11P51784 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.95■□□□□ 0.3
USP11P51784 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.95■□□□□ 0.3
USP11P51784 AC009093.2-202ENST00000620513 2079 ntBASIC16.95■□□□□ 0.3
USP11P51784 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
USP11P51784 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.95■□□□□ 0.3
USP11P51784 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.95■□□□□ 0.3
USP11P51784 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.94■□□□□ 0.3
USP11P51784 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.94■□□□□ 0.3
USP11P51784 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.94■□□□□ 0.3
USP11P51784 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 KRT8P4-201ENST00000509735 1454 ntBASIC16.94■□□□□ 0.3
USP11P51784 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
USP11P51784 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 AC018529.2-202ENST00000611482 3087 ntBASIC16.94■□□□□ 0.3
USP11P51784 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.94■□□□□ 0.3
USP11P51784 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.94■□□□□ 0.3
USP11P51784 AC244107.1-201ENST00000442033 332 ntBASIC16.94■□□□□ 0.3
USP11P51784 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.94■□□□□ 0.3
USP11P51784 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.94■□□□□ 0.3
USP11P51784 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.94■□□□□ 0.3
USP11P51784 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.94■□□□□ 0.3
USP11P51784 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.94■□□□□ 0.3
USP11P51784 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.94■□□□□ 0.3
USP11P51784 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.94■□□□□ 0.3
USP11P51784 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.94■□□□□ 0.3
USP11P51784 AC002472.3-201ENST00000640124 621 ntBASIC16.94■□□□□ 0.3
USP11P51784 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
USP11P51784 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
USP11P51784 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.94■□□□□ 0.3
USP11P51784 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
USP11P51784 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.94■□□□□ 0.3
USP11P51784 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.94■□□□□ 0.3
USP11P51784 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.94■□□□□ 0.3
USP11P51784 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.94■□□□□ 0.3
USP11P51784 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.94■□□□□ 0.3
USP11P51784 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP11P51784 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms