Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 ACKR1-201ENST00000368121 1240 ntBASIC13.45□□□□□ -0.26
CSNK1A1P48729 AC098614.1-201ENST00000368528 745 ntBASIC13.45□□□□□ -0.26
CSNK1A1P48729 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.45□□□□□ -0.26
CSNK1A1P48729 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.45□□□□□ -0.26
CSNK1A1P48729 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.45□□□□□ -0.26
CSNK1A1P48729 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 KRT8P35-201ENST00000483942 1338 ntBASIC13.44□□□□□ -0.26
CSNK1A1P48729 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.44□□□□□ -0.26
CSNK1A1P48729 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 AC011495.1-201ENST00000498085 584 ntBASIC13.44□□□□□ -0.26
CSNK1A1P48729 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSNK1A1P48729 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.44□□□□□ -0.26
CSNK1A1P48729 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms