Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.67■□□□□ 0.42
NEDD4P46934 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD4P46934 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.67■□□□□ 0.42
NEDD4P46934 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NEDD4P46934 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NEDD4P46934 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.66■□□□□ 0.42
NEDD4P46934 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.66■□□□□ 0.42
NEDD4P46934 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NEDD4P46934 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.66■□□□□ 0.42
NEDD4P46934 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.66■□□□□ 0.42
NEDD4P46934 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.66■□□□□ 0.42
NEDD4P46934 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 AC007292.2-201ENST00000593524 1812 ntBASIC17.66■□□□□ 0.42
NEDD4P46934 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NEDD4P46934 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.66■□□□□ 0.42
NEDD4P46934 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.66■□□□□ 0.42
NEDD4P46934 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 KRT8P4-201ENST00000509735 1454 ntBASIC17.66■□□□□ 0.42
NEDD4P46934 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.66■□□□□ 0.42
NEDD4P46934 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.66■□□□□ 0.42
NEDD4P46934 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NEDD4P46934 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.66■□□□□ 0.42
NEDD4P46934 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.66■□□□□ 0.42
NEDD4P46934 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NEDD4P46934 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.66■□□□□ 0.42
NEDD4P46934 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.66■□□□□ 0.42
NEDD4P46934 AC131206.1-201ENST00000538078 1211 ntBASIC17.66■□□□□ 0.42
NEDD4P46934 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.66■□□□□ 0.42
NEDD4P46934 MIR4741-201ENST00000579822 90 ntBASIC17.66■□□□□ 0.42
NEDD4P46934 PPY2P-201ENST00000582808 702 ntBASIC17.66■□□□□ 0.42
NEDD4P46934 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 AL359881.2-201ENST00000602973 570 ntBASIC17.66■□□□□ 0.42
NEDD4P46934 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.66■□□□□ 0.42
NEDD4P46934 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.66■□□□□ 0.42
NEDD4P46934 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.66■□□□□ 0.42
NEDD4P46934 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEDD4P46934 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.65■□□□□ 0.42
NEDD4P46934 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
NEDD4P46934 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.65■□□□□ 0.42
NEDD4P46934 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.65■□□□□ 0.42
NEDD4P46934 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.65■□□□□ 0.42
NEDD4P46934 AL009178.2-201ENST00000597278 2719 ntBASIC17.65■□□□□ 0.42
NEDD4P46934 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.65■□□□□ 0.42
NEDD4P46934 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.65■□□□□ 0.42
NEDD4P46934 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NEDD4P46934 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NEDD4P46934 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.65■□□□□ 0.42
NEDD4P46934 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.65■□□□□ 0.42
NEDD4P46934 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.65■□□□□ 0.42
NEDD4P46934 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.65■□□□□ 0.42
NEDD4P46934 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.65■□□□□ 0.42
NEDD4P46934 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NEDD4P46934 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.65■□□□□ 0.42
NEDD4P46934 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.65■□□□□ 0.42
NEDD4P46934 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.65■□□□□ 0.42
NEDD4P46934 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NEDD4P46934 SNX18-202ENST00000343017 3140 ntBASIC17.65■□□□□ 0.42
NEDD4P46934 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEDD4P46934 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NEDD4P46934 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NEDD4P46934 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
NEDD4P46934 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEDD4P46934 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms