Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MDH1P40925 MIR497HG-202ENST00000572453 3838 ntBASIC15.17■□□□□ 0.02
MDH1P40925 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MDH1P40925 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MDH1P40925 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MDH1P40925 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
MDH1P40925 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MDH1P40925 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
MDH1P40925 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 RN7SL832P-201ENST00000607781 1756 ntBASIC15.16■□□□□ 0.02
MDH1P40925 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.16■□□□□ 0.02
MDH1P40925 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MDH1P40925 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 AC090643.2-201ENST00000623442 2029 ntBASIC15.16■□□□□ 0.02
MDH1P40925 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.16■□□□□ 0.02
MDH1P40925 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.16■□□□□ 0.02
MDH1P40925 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MDH1P40925 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MDH1P40925 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
MDH1P40925 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.16■□□□□ 0.02
MDH1P40925 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
MDH1P40925 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.16■□□□□ 0.02
MDH1P40925 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.16■□□□□ 0.02
MDH1P40925 MIR1224-201ENST00000408193 85 ntBASIC15.16■□□□□ 0.02
MDH1P40925 TARDBPP1-201ENST00000442013 1203 ntBASIC15.16■□□□□ 0.02
MDH1P40925 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.16■□□□□ 0.02
MDH1P40925 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MDH1P40925 AC091304.2-201ENST00000564639 760 ntBASIC15.16■□□□□ 0.02
MDH1P40925 IFNL4P1-201ENST00000607083 540 ntBASIC15.16■□□□□ 0.02
MDH1P40925 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.16■□□□□ 0.02
MDH1P40925 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.16■□□□□ 0.02
MDH1P40925 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
MDH1P40925 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.16■□□□□ 0.02
MDH1P40925 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.16■□□□□ 0.02
MDH1P40925 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
MDH1P40925 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.16■□□□□ 0.02
MDH1P40925 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.16■□□□□ 0.02
MDH1P40925 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.16■□□□□ 0.02
MDH1P40925 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MDH1P40925 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MDH1P40925 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
MDH1P40925 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.15■□□□□ 0.02
MDH1P40925 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
MDH1P40925 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.15■□□□□ 0.02
MDH1P40925 AL365181.3-201ENST00000605886 3222 ntBASIC15.15■□□□□ 0.02
MDH1P40925 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.15■□□□□ 0.02
MDH1P40925 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 CES1P1-201ENST00000421606 1704 ntBASIC15.15■□□□□ 0.02
MDH1P40925 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.15■□□□□ 0.02
MDH1P40925 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MDH1P40925 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MDH1P40925 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC15.15■□□□□ 0.02
MDH1P40925 AC072061.1-201ENST00000569710 2234 ntBASIC15.15■□□□□ 0.02
MDH1P40925 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.15■□□□□ 0.02
MDH1P40925 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MDH1P40925 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.15■□□□□ 0.02
MDH1P40925 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.15■□□□□ 0.02
MDH1P40925 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.15■□□□□ 0.02
MDH1P40925 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.15■□□□□ 0.02
MDH1P40925 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.15■□□□□ 0.02
MDH1P40925 AC027307.2-201ENST00000591252 911 ntBASIC15.15■□□□□ 0.02
MDH1P40925 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.15■□□□□ 0.02
MDH1P40925 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.15■□□□□ 0.02
MDH1P40925 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.15■□□□□ 0.02
MDH1P40925 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MDH1P40925 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
MDH1P40925 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 AGAP10P-201ENST00000454844 2418 ntBASIC15.15■□□□□ 0.02
MDH1P40925 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MDH1P40925 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MDH1P40925 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MDH1P40925 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.14■□□□□ 0.01
MDH1P40925 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms