Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.15□□□□□ -0.62
CKS2P33552 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 KRT8P22-201ENST00000562317 1415 ntBASIC11.15□□□□□ -0.62
CKS2P33552 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CKS2P33552 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
CKS2P33552 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.15□□□□□ -0.62
CKS2P33552 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS2P33552 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS2P33552 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS2P33552 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
CKS2P33552 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
CKS2P33552 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS2P33552 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS2P33552 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS2P33552 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS2P33552 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
CKS2P33552 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 AC105206.1-202ENST00000314927 2368 ntBASIC11.14□□□□□ -0.63
CKS2P33552 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.14□□□□□ -0.63
CKS2P33552 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CKS2P33552 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.14□□□□□ -0.63
CKS2P33552 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CKS2P33552 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CKS2P33552 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
CKS2P33552 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 REXO1L4P-201ENST00000605109 1937 ntBASIC11.14□□□□□ -0.63
CKS2P33552 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.14□□□□□ -0.63
CKS2P33552 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 RNPS1P1-201ENST00000507437 918 ntBASIC11.14□□□□□ -0.63
CKS2P33552 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
CKS2P33552 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.14□□□□□ -0.63
CKS2P33552 AC096734.2-201ENST00000562054 433 ntBASIC11.14□□□□□ -0.63
CKS2P33552 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.14□□□□□ -0.63
CKS2P33552 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.14□□□□□ -0.63
CKS2P33552 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 MIR3652-201ENST00000579335 131 ntBASIC11.14□□□□□ -0.63
CKS2P33552 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 AL031008.1-201ENST00000619963 541 ntBASIC11.14□□□□□ -0.63
CKS2P33552 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.14□□□□□ -0.63
CKS2P33552 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.14□□□□□ -0.63
CKS2P33552 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
CKS2P33552 MAPK10-262ENST00000641051 5738 ntBASIC11.14□□□□□ -0.63
CKS2P33552 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.14□□□□□ -0.63
CKS2P33552 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS2P33552 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.14□□□□□ -0.63
CKS2P33552 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS2P33552 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
CKS2P33552 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS2P33552 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms