Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 ST13P19-201ENST00000442505 1124 ntBASIC16.56■□□□□ 0.24
CTGFP29279 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.56■□□□□ 0.24
CTGFP29279 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTGFP29279 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
CTGFP29279 AL139339.2-201ENST00000608063 657 ntBASIC16.56■□□□□ 0.24
CTGFP29279 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTGFP29279 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.56■□□□□ 0.24
CTGFP29279 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.56■□□□□ 0.24
CTGFP29279 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.56■□□□□ 0.24
CTGFP29279 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CTGFP29279 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CTGFP29279 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CTGFP29279 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTGFP29279 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CTGFP29279 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CTGFP29279 AC006372.4-201ENST00000624122 1543 ntBASIC16.55■□□□□ 0.24
CTGFP29279 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.55■□□□□ 0.24
CTGFP29279 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.55■□□□□ 0.24
CTGFP29279 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 MIR566-201ENST00000385187 94 ntBASIC16.55■□□□□ 0.24
CTGFP29279 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CTGFP29279 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CTGFP29279 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.55■□□□□ 0.24
CTGFP29279 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.55■□□□□ 0.24
CTGFP29279 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 AC095040.1-201ENST00000513286 675 ntBASIC16.55■□□□□ 0.24
CTGFP29279 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.55■□□□□ 0.24
CTGFP29279 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.55■□□□□ 0.24
CTGFP29279 TREHP1-201ENST00000531328 465 ntBASIC16.55■□□□□ 0.24
CTGFP29279 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 PEBP1P2-201ENST00000603980 558 ntBASIC16.55■□□□□ 0.24
CTGFP29279 HMGB1P24-201ENST00000611897 328 ntBASIC16.55■□□□□ 0.24
CTGFP29279 SSR4P1-203ENST00000599569 2260 ntBASIC16.55■□□□□ 0.24
CTGFP29279 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.55■□□□□ 0.24
CTGFP29279 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.55■□□□□ 0.24
CTGFP29279 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CTGFP29279 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.55■□□□□ 0.24
CTGFP29279 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CTGFP29279 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTGFP29279 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 AC087481.3-201ENST00000602886 1894 ntBASIC16.54■□□□□ 0.24
CTGFP29279 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTGFP29279 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTGFP29279 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.54■□□□□ 0.24
CTGFP29279 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.54■□□□□ 0.24
CTGFP29279 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 AC244197.1-201ENST00000456494 951 ntBASIC16.54■□□□□ 0.24
CTGFP29279 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTGFP29279 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.54■□□□□ 0.24
CTGFP29279 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.54■□□□□ 0.24
CTGFP29279 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.54■□□□□ 0.24
CTGFP29279 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.54■□□□□ 0.24
CTGFP29279 AC124068.2-201ENST00000569473 1109 ntBASIC16.54■□□□□ 0.24
CTGFP29279 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms