Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AC012085.1-201ENST00000548270 765 ntBASIC14.33□□□□□ -0.12
MMP11P24347 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.33□□□□□ -0.12
MMP11P24347 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.33□□□□□ -0.12
MMP11P24347 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.33□□□□□ -0.12
MMP11P24347 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.33□□□□□ -0.12
MMP11P24347 RN7SL48P-201ENST00000579283 293 ntBASIC14.33□□□□□ -0.12
MMP11P24347 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.33□□□□□ -0.12
MMP11P24347 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
MMP11P24347 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
MMP11P24347 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.33□□□□□ -0.12
MMP11P24347 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MMP11P24347 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
MMP11P24347 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
MMP11P24347 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.33□□□□□ -0.12
MMP11P24347 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.33□□□□□ -0.12
MMP11P24347 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
MMP11P24347 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.33□□□□□ -0.12
MMP11P24347 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP11P24347 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 AC005089.1-201ENST00000619486 2241 ntBASIC14.33□□□□□ -0.12
MMP11P24347 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
MMP11P24347 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MMP11P24347 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
MMP11P24347 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.32□□□□□ -0.12
MMP11P24347 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
MMP11P24347 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
MMP11P24347 LRRC59-203ENST00000576448 1531 ntBASIC14.32□□□□□ -0.12
MMP11P24347 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.32□□□□□ -0.12
MMP11P24347 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.32□□□□□ -0.12
MMP11P24347 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.32□□□□□ -0.12
MMP11P24347 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MMP11P24347 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MMP11P24347 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.32□□□□□ -0.12
MMP11P24347 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
MMP11P24347 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.32□□□□□ -0.12
MMP11P24347 AC022494.1-201ENST00000466044 728 ntBASIC14.32□□□□□ -0.12
MMP11P24347 MIR4525-201ENST00000580000 75 ntBASIC14.32□□□□□ -0.12
MMP11P24347 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.32□□□□□ -0.12
MMP11P24347 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.32□□□□□ -0.12
MMP11P24347 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.32□□□□□ -0.12
MMP11P24347 AHCYP2-201ENST00000430630 1300 ntBASIC14.32□□□□□ -0.12
MMP11P24347 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.32□□□□□ -0.12
MMP11P24347 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
MMP11P24347 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.32□□□□□ -0.12
MMP11P24347 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.32□□□□□ -0.12
MMP11P24347 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MMP11P24347 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
MMP11P24347 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MMP11P24347 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
MMP11P24347 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.31□□□□□ -0.12
MMP11P24347 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
MMP11P24347 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
MMP11P24347 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
MMP11P24347 AL158070.2-201ENST00000623713 1621 ntBASIC14.31□□□□□ -0.12
MMP11P24347 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.31□□□□□ -0.12
MMP11P24347 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MMP11P24347 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.31□□□□□ -0.12
MMP11P24347 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms