Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC3P19447 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 AC007326.2-201ENST00000624224 7579 ntBASIC17.45■□□□□ 0.38
ERCC3P19447 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ERCC3P19447 AC063926.3-201ENST00000624734 5658 ntBASIC17.45■□□□□ 0.38
ERCC3P19447 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC3P19447 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ERCC3P19447 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ERCC3P19447 AL662890.1-201ENST00000396818 632 ntBASIC17.45■□□□□ 0.38
ERCC3P19447 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.45■□□□□ 0.38
ERCC3P19447 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC3P19447 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ERCC3P19447 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC3P19447 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC3P19447 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC3P19447 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC3P19447 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 ZACNP1-201ENST00000612259 710 ntBASIC17.45■□□□□ 0.38
ERCC3P19447 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.45■□□□□ 0.38
ERCC3P19447 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC3P19447 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC3P19447 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC3P19447 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ERCC3P19447 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ERCC3P19447 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
ERCC3P19447 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC3P19447 AC104640.1-201ENST00000562617 2109 ntBASIC17.45■□□□□ 0.38
ERCC3P19447 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ERCC3P19447 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC3P19447 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC3P19447 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.44■□□□□ 0.38
ERCC3P19447 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ERCC3P19447 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ERCC3P19447 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.44■□□□□ 0.38
ERCC3P19447 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC3P19447 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ERCC3P19447 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ERCC3P19447 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.44■□□□□ 0.38
ERCC3P19447 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ERCC3P19447 NKAIN1P1-201ENST00000435754 582 ntBASIC17.44■□□□□ 0.38
ERCC3P19447 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.44■□□□□ 0.38
ERCC3P19447 HIST2H2BB-201ENST00000449108 381 ntBASIC17.44■□□□□ 0.38
ERCC3P19447 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.44■□□□□ 0.38
ERCC3P19447 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC3P19447 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.44■□□□□ 0.38
ERCC3P19447 AC044849.1-201ENST00000519737 1188 ntBASIC17.44■□□□□ 0.38
ERCC3P19447 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.44■□□□□ 0.38
ERCC3P19447 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC3P19447 AC106820.3-201ENST00000561653 397 ntBASIC17.44■□□□□ 0.38
ERCC3P19447 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.44■□□□□ 0.38
ERCC3P19447 NDUFV2P1-201ENST00000596415 907 ntBASIC17.44■□□□□ 0.38
ERCC3P19447 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ERCC3P19447 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 AC090616.6-203ENST00000579186 1945 ntBASIC17.44■□□□□ 0.38
ERCC3P19447 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 AC105250.1-201ENST00000509378 2057 ntBASIC17.44■□□□□ 0.38
ERCC3P19447 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ERCC3P19447 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC3P19447 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC3P19447 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
ERCC3P19447 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.43■□□□□ 0.38
ERCC3P19447 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.43■□□□□ 0.38
ERCC3P19447 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 AC016700.1-201ENST00000429424 312 ntBASIC17.43■□□□□ 0.38
ERCC3P19447 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.43■□□□□ 0.38
ERCC3P19447 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.43■□□□□ 0.38
ERCC3P19447 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms