Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.21■□□□□ 0.19
CD58P19256 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CD58P19256 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CD58P19256 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
CD58P19256 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CD58P19256 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CD58P19256 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CD58P19256 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.21■□□□□ 0.19
CD58P19256 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.21■□□□□ 0.19
CD58P19256 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.21■□□□□ 0.19
CD58P19256 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.21■□□□□ 0.19
CD58P19256 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.21■□□□□ 0.19
CD58P19256 AC026434.2-201ENST00000506094 1078 ntBASIC16.21■□□□□ 0.19
CD58P19256 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.21■□□□□ 0.19
CD58P19256 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.21■□□□□ 0.19
CD58P19256 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.21■□□□□ 0.19
CD58P19256 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.21■□□□□ 0.19
CD58P19256 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.21■□□□□ 0.19
CD58P19256 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.21■□□□□ 0.19
CD58P19256 BTNL10-201ENST00000595971 695 ntBASIC16.21■□□□□ 0.19
CD58P19256 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.21■□□□□ 0.19
CD58P19256 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.21■□□□□ 0.19
CD58P19256 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.21■□□□□ 0.19
CD58P19256 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD58P19256 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.21■□□□□ 0.18
CD58P19256 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CD58P19256 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
CD58P19256 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.21■□□□□ 0.18
CD58P19256 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CD58P19256 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.21■□□□□ 0.18
CD58P19256 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.21■□□□□ 0.18
CD58P19256 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 LINC01101-201ENST00000622953 1884 ntBASIC16.2■□□□□ 0.18
CD58P19256 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD58P19256 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD58P19256 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.2■□□□□ 0.18
CD58P19256 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 FGD5P1-202ENST00000614866 2498 ntBASIC16.2■□□□□ 0.18
CD58P19256 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CD58P19256 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CD58P19256 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.2■□□□□ 0.18
CD58P19256 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD58P19256 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CD58P19256 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD58P19256 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CD58P19256 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CD58P19256 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.19■□□□□ 0.18
CD58P19256 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD58P19256 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD58P19256 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD58P19256 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD58P19256 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD58P19256 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.19■□□□□ 0.18
CD58P19256 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD58P19256 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CD58P19256 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CD58P19256 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD58P19256 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD58P19256 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD58P19256 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD58P19256 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD58P19256 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.19■□□□□ 0.18
CD58P19256 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CD58P19256 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.19■□□□□ 0.18
CD58P19256 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD58P19256 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms