Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 ENPP7P5-201ENST00000541031 1031 ntBASIC13.54□□□□□ -0.24
HLA-DOBP13765 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DOBP13765 AL009178.2-201ENST00000597278 2719 ntBASIC13.54□□□□□ -0.24
HLA-DOBP13765 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DOBP13765 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 AC007292.2-201ENST00000593524 1812 ntBASIC13.53□□□□□ -0.24
HLA-DOBP13765 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 AC114812.1-204ENST00000449669 728 ntBASIC13.53□□□□□ -0.24
HLA-DOBP13765 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 AC093433.1-201ENST00000458048 571 ntBASIC13.53□□□□□ -0.24
HLA-DOBP13765 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 AP005019.2-201ENST00000615104 511 ntBASIC13.53□□□□□ -0.24
HLA-DOBP13765 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.53□□□□□ -0.24
HLA-DOBP13765 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
HLA-DOBP13765 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DOBP13765 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DOBP13765 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.52□□□□□ -0.24
HLA-DOBP13765 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.52□□□□□ -0.24
HLA-DOBP13765 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
HLA-DOBP13765 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
HLA-DOBP13765 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DOBP13765 AC005912.2-201ENST00000619492 2400 ntBASIC13.52□□□□□ -0.24
HLA-DOBP13765 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
HLA-DOBP13765 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.52□□□□□ -0.24
HLA-DOBP13765 AL136379.1-201ENST00000623471 2642 ntBASIC13.52□□□□□ -0.24
HLA-DOBP13765 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DOBP13765 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DOBP13765 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DOBP13765 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.52□□□□□ -0.25
HLA-DOBP13765 EIF3FP3-201ENST00000434851 1086 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms