Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 AC022137.2-201ENST00000503482 481 ntBASIC15.6■□□□□ 0.09
CD48P09326 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.6■□□□□ 0.09
CD48P09326 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.6■□□□□ 0.09
CD48P09326 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CD48P09326 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CD48P09326 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CD48P09326 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 KRT8P35-201ENST00000483942 1338 ntBASIC15.6■□□□□ 0.09
CD48P09326 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.6■□□□□ 0.09
CD48P09326 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.6■□□□□ 0.09
CD48P09326 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CD48P09326 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD48P09326 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.6■□□□□ 0.09
CD48P09326 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CD48P09326 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CD48P09326 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.59■□□□□ 0.09
CD48P09326 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.59■□□□□ 0.09
CD48P09326 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 AC138761.1-201ENST00000584393 385 ntBASIC15.59■□□□□ 0.09
CD48P09326 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CD48P09326 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CD48P09326 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.59■□□□□ 0.09
CD48P09326 GRK6P1-201ENST00000400595 1711 ntBASIC15.59■□□□□ 0.09
CD48P09326 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD48P09326 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CD48P09326 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.59■□□□□ 0.09
CD48P09326 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.58■□□□□ 0.09
CD48P09326 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CD48P09326 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CD48P09326 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.58■□□□□ 0.09
CD48P09326 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.58■□□□□ 0.09
CD48P09326 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CD48P09326 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CD48P09326 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.58■□□□□ 0.08
CD48P09326 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.58■□□□□ 0.08
CD48P09326 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.58■□□□□ 0.08
CD48P09326 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.58■□□□□ 0.08
CD48P09326 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.58■□□□□ 0.08
CD48P09326 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.58■□□□□ 0.08
CD48P09326 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.58■□□□□ 0.08
CD48P09326 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.58■□□□□ 0.08
CD48P09326 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.58■□□□□ 0.08
CD48P09326 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.58■□□□□ 0.08
CD48P09326 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.58■□□□□ 0.08
CD48P09326 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.58■□□□□ 0.08
CD48P09326 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.58■□□□□ 0.08
CD48P09326 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.58■□□□□ 0.08
CD48P09326 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD48P09326 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CD48P09326 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.58■□□□□ 0.08
CD48P09326 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.58■□□□□ 0.08
CD48P09326 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms